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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs1772408 chr1:159005649 A/G 1.62E-5 401 9.63 17.77 14.92 KM Plot
LGG rs17726488 chr10:73918058 A/G 3.31E-9 407 3.8 11.7 15.72 KM Plot
LGG rs17748133 chr18:34281617 A/G 2.03E-6 407 4.1 17.57 15.18 KM Plot
LGG rs17773487 chr16:77762882 C/G 2.15E-5 407 15.78 13.57 4.13 KM Plot
LGG rs17780305 chr18:57158200 A/G 0 407 15.17 16.73 1.62 KM Plot
LGG rs17786027 chr20:48446596 A/G 7.95E-9 407 15.72 10.6 6.83 KM Plot
LGG rs17786130 chr20:48469564 A/G 7.95E-9 407 15.72 10.6 6.83 KM Plot
LGG rs17838427 chr6:151852039 G/A 2.43E-8 405 15.47 15.43 3.77 KM Plot
LGG rs17878361 chr10:81688477 C/T 5.77E-5 404 15.25 13.95 21.82 KM Plot
LGG rs17878830 chr10:81690780 C/T 6.89E-5 405 15.25 13.13 21.82 KM Plot
LGG rs17879395 chr10:81691125 A/G 6.89E-5 405 15.25 13.13 21.82 KM Plot
LGG rs17879405 chr10:81689540 C/T 5.98E-5 404 15.3 13.13 21.82 KM Plot
LGG rs180855097 chr2:228075793 T/C 0 404 15.72 12.03 1.23 KM Plot
LGG rs1817480 chr6:151892843 T/C 5.86E-14 402 15.68 13.87 1.3 KM Plot
LGG rs181859780 chr6:57031978 T/C 3.7E-6 401 15.25 15.43 7.8 KM Plot